人乳头瘤病毒-6 L1蛋白B-细胞优势表位作为多肽疫苗的研究

本研究分析了人乳头瘤病毒-6型L1外壳蛋白之B-细胞优势表位,并拟以此为基础制作表位多肽疫苗。研究中采用Goldkey和PC／Gene软件系统综合分析HPV6之L1蛋白B-细胞优势表位后,Fmoc固相合成表位多肽,通过HPLC纯化和毛细管电泳分析其纯度。与佐剂完全乳化后,免疫小鼠,进行动物水平的免疫效果评价。取免疫小鼠血清,与HPV-6 DNA阳性的尖锐湿疣患者疣体组织上清液结合,以鉴定免疫小鼠所产生抗体的特异性。发现L1蛋白第425-439位和第486-500位具有较高的免疫原性,可明显诱导小鼠血清抗体滴度升高,且该抗体与人尖锐湿疣疣体组织上清液呈阳性反应。说明所选这两个肽段为HPV6之L1蛋白的B-细胞优势表位,但诱导产生的抗体是否具有功能特异性,正在做进一步研究。     

西双版纳澜沧江河谷竹林蚊类群落学特征的初步研究

为了解热带竹林的蚊类群落学特征和继续探讨蚊类群落学的调查和分析方法,采用随意全捕积水较久树桩内蚊幼,并对调查资料进行群落学特征分析的方法开展研究,共发现库蚊亚科和巨蚊亚科的8属,14亚属,23种蚊虫;分析显示各蚊各上的优势度均较低;优势种侧白伊蚊、圆斑伊蚊和幼小库蚊的优热度仅分别是26.22、25.26和23.74;群薄的Shannon-Wiener多样性指数和均匀性指数分别为2.45和0.78。结论为此群薄蚊种丰富,但无任何蚊种占绝对优势,群落稳定性差。     

Feedback regulation of constant leaf standing crop in Sasa tsuboiana grasslands

The standing crop of current leaves of Sasa tsuboiana was measured on the upper slopes of Mount Horai, Shiga prefecture, central Japan. Upper one-year-old branches in the canopy produced greater mass of current leaves than lower ones. Furthermore, culms in artificially thinned plots produced larger leaf mass per culm than those in control plots. These results reveal that leaf production is positively correlated with light intensity. Therefore, when the leaf standing crop in a given year is somewhat smaller than usual, it may increase in the following year because the branches will receive stronger light. This feedback regulation causes uniformity in the horizontal distribution of the leaf standing crop. The constancy of the leaf standing crop throughout dense stands of different heights indicates that a common equilibrium value of the leaf standing crop exists. This uniform distribution leads to an almost-uniform weak light intensity under the canopy of S. tsuboiana, and can consequently exclude other plant species.     

Experiments with artificial nests provide evidence for ant community stratification and nest site limitation in a tropical forest

Ants are dominant in tropical forests and many species nest in hollow cavities. The manner in which species are vertically stratified in these complex habitats is not known, with lack of nest sites being proposed to limit ant populations. Here, we assess ant community stratification and nest site limitation in a lowland rainforest in New Guinea using experimental addition of artificial bamboo nests of two cavity sizes (small: ~12 mm large: ~32 mm diameter) placed at ground level, in the understorey, and in the canopy. We also conducted a pilot experiment to test the utility of nest translocation. Nests were checked for occupancy after 10 weeks and half of the occupied nests were then translocated between forest plots, while keeping same vertical position. Occupancy of small nests was much higher in the understorey and canopy than at ground level (~75% vs. ~25%). Translocation was successful, as a majority of nests was inhabited by the same species before and after translocation and there was no impact of translocation to a different plot compared to the control, except for a reduction in colony size at ground level. Our experiment demonstrates a vertical stratification in community composition of ants nesting in hollow dead cavities and shows that these ants are more nest site limited in the higher strata than at ground level. Use of small artificial cavities has great potential for future experimental studies, especially for those focused on arboreal ants, as occupancy is high and translocation does not negatively affect their colony size. Abstract in Tok Pisin is available with online material.     

Relative efficiency of preferred and nonpreferred patterns of lateralized foraging in the gentle lemur (Hapalemur griseus)

Lateralized patterns of hand use in species-typical bamboo shoot foraging were evaluated for efficiency in five female and six male gentle lemurs (Hapalemur griseus sp.). Efficiency was defined as amount of time required to complete a foraging response sequence. The foraging pattern consisted of four component movements: PULL-IN, COUNTERFORCE, TURN, and FEED-IN. These component movements had been shown in a previous study to incorporate lateral hand biases that formed subsets of patterns that were characteristic for each gentle lemur. The duration of each foraging sequence was measured from the beginning of the first component to the initiation of the terminal component. Frequency of use scores were employed to divide the pattern sequences of each subject into preferred and nonpreferred categories. A within-subjects comparison of the mean durations of preferred patterns (M = 2.56 sec) with those of non- preferred patterns (M = 3.02 sec) found that preferred patterns were executed more rapidly, t(10) = 3.36, P = .007. A multiple regression showed that order of pattern preference accounted for 89% of the variance in mean duration of response time (R² = .89, P = .056). Thus, the use of preferred lateralized hand patterns resulted in more rapid bamboo shoot harvesting. Speed in foraging may be regarded as an adaptive strategy for a species that subsists on a high bulk, low nutrient density food such as bamboo. © 1995 Wiley-Liss, Inc.     

毛竹GRF转录因子家族的全基因组鉴定与分析

利用生物信息学方法,于毛竹(Phyllostachys edulis (Carr.) Lehaie)全基因组中鉴定获得18个GRF转录因子,并对其理化特性、保守结构域、系统发育关系、mi R396靶位点以及基因表达模式进行了分析。结果表明,18个Pe GRF蛋白长度为170～551 aa,分子量为18.5～58.8 k D;这些Pe GRF蛋白均具有QLQ和WRC结构域,部分Pe GRF含有FFD和TQL保守结构域。对毛竹、拟南芥(Arabidopsis thaliana (L.) Heynh)和水稻(Oryza sativa L.)的系统进化分析结果显示,毛竹18个GRF可分为3个亚类,且单子叶植物毛竹和水稻的GRF转录因子亲缘关系更近。mi R396靶位点预测分析结果发现,在13个Pe GRF基因序列的编码区存在毛竹mi R396结合位点; Pe GRF基因表达模式分析结果显示,Pe GRF主要在毛竹的竹笋中表达。     

小径竹密度对雷公鹅耳枥幼苗早期更新的影响

通过去除法控制竹丛密度,人为设置4种竹丛密度梯度[密度1:(3.83±0.53)株/m~2;密度2:(16±1.80)株/m~2;密度3:(39±1.69)株/m~2;密度4:(69±2.15)株/m~2],测定不同密度竹丛下的微环境(包括土壤温度、湿度、电导率、凋落物厚度),研究竹丛密度及微环境对雷公鹅耳枥(Carpinus viminea Wall.)幼苗数量、存活动态、生长情况的影响。结果显示,竹丛密度对环境有显著影响,随着竹丛密度的增加,竹丛盖度、凋落物厚度、土壤温度升高明显;雷公鹅耳枥幼苗萌生量显著减少,4组密度梯度中幼苗数量分布依次排序为:密度1(28.53±3.14)株/m~2密度2(17.36±1.45)株/m~2密度3(12.36±0.93)株/m~2密度4(8.92±0.93)株/m~2,表明随着小径竹密度增加,其对雷公鹅耳枥幼苗萌发的抑制作用越强;小径竹的密集生长可对雷公鹅耳枥幼苗的存活率产生影响,且对幼苗的生长具有一定抑制作用。研究结果表明小径竹密集生长的环境不仅抑制了雷公鹅耳枥新生幼苗的分布和幼苗生长,还对种群的更新以及森林群落的演替产生一定的负面影响。     

基于转录组测序的慈竹笋木质素基因筛选及其表达分析

慈竹（Bambusa emeiensis）纤维素含量丰富,是较好的造纸原料,但竹茎中木质素影响着制浆生产及纸浆质量。目前,对慈竹木质素生物合成机制所知甚少,这限制了遗传调控竹木质素的研究。本文以拟南芥、水稻等植物的已知木质素基因作为查询序列,通过BLASTp和系统进化分析,从10、50、100和150 cm慈竹笋转录组数据中筛选到351个木质素生物合成相关Unigenes,包括51个LAC,37个4CL、26个PAL、34个CCR和25个CAD相关转录子,其数量高于其他已报道的竹类植物。转录丰度和定量基因表达分析发现16个木质素基因,包括2个PAL、5个CCR、3个4CL、2个CADH2和4个LAC,随着笋发育而表达上调,表明其可能与发育性木质素积累相关。